Shanshan Pythoner Love CPP

Oversample Method SMOTE

2017-01-10

Over-sampling with replacement and has noted that it doesn’t significantly improve minority class recognition. Chawla proposed an over-sampling approach in which the minority class is over-sampled by creating “synthetic” examples rather than by over-sampling with replacement.

They generate synthetic examples in a less application-specific manner, by operating in “feature space” rather than “data space”. The minority class is over-sampled by taking each minority class sample and introducing synthetic examples along the line segments joining any/all of the k minority class nearest neighbors. Depending upon the amount of over-sampling required, neighbors from the k nearest neighbors are randomly chosen.

Its pseudo-code is :

In python package imbalanced-learn, this method can be achieved.

imblearn.over_sampling.SMOTE

import matplotlib.pyplot as plt
import seaborn as sns
from sklearn.datasets import make_classification
from sklearn.decomposition import PCA

from imblearn.over_sampling import SMOTE

print(__doc__)

sns.set()

# Define some color for the plotting
almost_black = '#262626'
palette = sns.color_palette()


# Generate the dataset
X, y = make_classification(n_classes=2, class_sep=2, weights=[0.1, 0.9],
                           n_informative=3, n_redundant=1, flip_y=0,
                           n_features=20, n_clusters_per_class=1,
                           n_samples=5000, random_state=10)

# Instanciate a PCA object for the sake of easy visualisation
pca = PCA(n_components=2)
# Fit and transform x to visualise inside a 2D feature space
X_vis = pca.fit_transform(X)

# Apply regular SMOTE
sm = SMOTE(kind='regular')
X_resampled, y_resampled = sm.fit_sample(X, y)
X_res_vis = pca.transform(X_resampled)

# Two subplots, unpack the axes array immediately
f, (ax1, ax2) = plt.subplots(1, 2)

ax1.scatter(X_vis[y == 0, 0], X_vis[y == 0, 1], label="Class #0", alpha=0.5,
            edgecolor=almost_black, facecolor=palette[0], linewidth=0.15)
ax1.scatter(X_vis[y == 1, 0], X_vis[y == 1, 1], label="Class #1", alpha=0.5,
            edgecolor=almost_black, facecolor=palette[2], linewidth=0.15)
ax1.set_title('Original set')

ax2.scatter(X_res_vis[y_resampled == 0, 0], X_res_vis[y_resampled == 0, 1],
            label="Class #0", alpha=.5, edgecolor=almost_black,
            facecolor=palette[0], linewidth=0.15)
ax2.scatter(X_res_vis[y_resampled == 1, 0], X_res_vis[y_resampled == 1, 1],
            label="Class #1", alpha=.5, edgecolor=almost_black,
            facecolor=palette[2], linewidth=0.15)
ax2.set_title('SMOTE regular')

plt.show()

The result is:

More SMOTE Improvement methods can be got here imblearn.over_sampling.SMOTE

You can get the paper for this method here: SMOTE: Synthetic Minority Over-sampling Technique


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